The CR1 Charger is a simple limited feature charger, claiming to be a SMART charger. No, you won’t hurt it or the battery as long as the battery in play is equipped with a protection circuit module.
As Don notes if the PCM is NOT resettable; the PCM will need to replaced.
The protection module is likely OPEN due to the battery realizing the VOLTAGE cut-out parameter value. Parasitic current draw and or self discharge characteristics of said battery given adequate time will damage unmonitored batteries/cells. If a single cells SoC degrades to less than 1.5V or so even for a short period of time the battery will be suspect. Cell degradation will result in a loss of capacity and in some cases internal shorting. Additionally this 4S2P 14.4V battery is comprised of two sets of four 2600mAh cells wired in series. The two four cell batteries are then wired together in parallel and wrapped together. If a single cell of either four cell battery is suspect, halve the battery capacity is lost even though the voltage is in range. These anomalies are realized with a full feature SMART charger capable of cycling batteries and providing acquired data for review.
Lithium cells typically last four years and or 500 cycles or so, the clock starts when the chemicals are combined, matters not if their sitting on the shelve, unused.
How much will it cost to have said aged battery serviced and brought back to life with its degraded performance curve, is it worth considering? Capacity typically degrades at a rate of 5% PER year initially and progressively gets worse. One with the pre-requisite set of skills could easily ascertain the condition of suspect batteries, and together with a SMART charger could cycle the battery/cells under load(s) to determine their capacity too.
I’ve repaired many batteries over the years, PCM’s are readily available with and without BALANCE charge features. I equip repaired batteries with balance charge pigtails to monitor individual cell performance while charging and or discharging. SMART chargers typically offer multiple charge regimens, CHARGE, DISCHARGE, CHARGE/DISCHARGE CYCLING, BALANCE CHARGE AND STORE CHARGE. Storing batteries for three months or better merits consideration for the STORGE charge regimen IMO. Storage charge voltage parameters are typically 40-50% of the batteries rated capacity or 3.8/9V per cell.
Michael